Обобщение этого результата на социальные системы дает основание предположить, что турбулентная жизнь является более разнообразной, а зачастую, более содержательной и более интересной, чем ламинарная. Для реализации больших возможностей турбулентной жизни нужны, конечно необходимые условия, которые могут быть реализованы лишь в открытых системах. Читать далее →
Расставание Паули с Борном прошло, как говорится, «без слез»: профессору нужен был другой ассистент, а юному исследователю – другой научный руководитель и соавтор. Научный стиль Борна, ставящий на первое место математическую модель и расчеты, был чужд стилю Паули, опиравшемуся, прежде всего, на физическую интуицию и наглядные модели.
Часто возникали по каким-то вопросам споры, в которых Леонид Иванович выступал более или менее на равных с остальными. При этом можно было с ним спорить и, случалось, отстаивать свою правоту. Но в чём не было равных с Леонидом Ивановичем — это в умении увидеть новые постановки задач, которые должны и могут быть решены. Именно поэтому у Леонида Ивановича так много учеников. Читать далее →
Денни, оставшийся в юности без матери (она умерла от рака), провел лето после средней школы в тюрьме несовершеннолетних за пьяную драку. Судья отпустил его при условии, что он поступит в колледж. В течение года после окончания колледжа он создал компанию по производству строительных химикатов, чья продажа через пару десятилетий позволила ему комфортно уйти в отставку в возрасте 45 лет и отправиться во Флориду играть в гольф. Читать далее →
Учреждение Радиобиологического отдела стало важнейшим шагом на пути преодоления монополии Лысенко. Дотянуться до атомного центра и задушить своими мозолистыми ладонями очередное научное учреждение в области генетики Лысенко было не под силу.Читать далее →
Dobzhansky T: Genetics and the origin of species, 2nd edn. New York: Columbia University Press; 1951.
Dobzhansky T: Nothing in biology makes sense except in the light of evolution. The American Biology Teacher 1973, 35, 125-129.
Koonin EV: The Logic of Chance: The Nature and Origin of Biological Evolution Upper Saddle River, NJ: FT press; 2011.
Goldenfeld N, Woese C: Biology’s next revolution. Nature 2007, 445(7126), 369.
Goldenfeld N, Woese CR: Life is Physics: Evolution as a Collective Phenomenon Far From Equilibrium. Annu Rev CondensMatter Phys 2011, 2, 375-399.
Sella G, Hirsh AE: The application of statistical physics to evolutionary biology. Proc Natl Acad Sci U S A 2005, 102(27), 9541-9546.
Ao P: Emerging of Stochastic Dynamical Equalities and Steady State Thermodynamics from Darwinian Dynamics. Commun Theor Phys 2008, 49(5), 1073-1090.
Barton NH, Coe JB: On the application of statistical physics to evolutionary biology. J Theor Biol 2009, 259(2), 317-324.
de Vladar HP, Barton NH: The contribution of statistical physics to evolutionary biology. Trends Ecol Evol 2011, 26(8), 424-432.
Barreiro LB, Quintana-Murci L: From evolutionary genetics to human immunology: how selection shapes host defence genes. Nat Rev Genet 2010, 11(1), 17-30.
Seppala O: Natural selection on quantitative immune defence traits: a comparison between theory and data. J Evol Biol 2015, 28(1), 1-9.
Bozic I, Antal T, Ohtsuki H, Carter H, Kim D, Chen S, Karchin R, Kinzler KW, Vogelstein B, Nowak MA: Accumulation of driver and passenger mutations during tumor progression. Proc Natl Acad Sci U S A 2010, 107(43), 18545-18550.
Casas-Selves M, Degregori J: How cancer shapes evolution, and how evolution shapes cancer. Evolution (N Y) 2011, 4(4), 624-634.
McFarland CD, Korolev KS, Kryukov GV, Sunyaev SR, Mirny LA: Impact of deleterious passenger mutations on cancer progression. Proc Natl Acad Sci U S A 2013, 110(8), 2910-2915.
McFarland CD, Mirny LA, Korolev KS: Tug-of-war between driver and passenger mutations in cancer and other adaptive processes. Proc Natl Acad Sci U S A 2014, 111(42), 15138-15143.
Rosenberg A: Darwininan Reductionism, Or, How to Stop Worrying and Love MoOlecular Biology Chicago: Univ Chicago Press; 2006.
Laughlin RB, Pines D: The theory of everything. Proc Natl Acad Sci U S A 2000, 97(1), 28-31.
Laughlin RB, Pines D, Schmalian J, Stojkovic BP, Wolynes P: The middle way. Proc Natl Acad Sci U S A 2000, 97(1), 32-37.
Anderson PW: More is different. Science 1972, 177(4047), 393-396.
Laughlin RB: A Different Universe: Reinventing Physics From the Bottom Down. New York: Basic Books; 2008.
Anderson PW: More and Different: Notes from a Thoughtful Curmudgeon. Singapour: World Scientific Publishing Company; 2011.
West G: Scale: The Universal Laws of Growth, Innovation, Sustainability, and the Pace of Life in Organisms, Cities, Economies, and Companies. New York: Penguin Press; 2017.
Schroedinger E: What is Life? The Physical Aspect of the Living Cell. Dublin: Trinity College Press; 1944.
Watson JD, Crick FH: Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid. Nature 1953, 171(4356), 737-738.
Watson JD, Crick FH: Genetical implications of the structure of deoxyribonucleic acid. Nature 1953, 171(4361), 964-967.
Frank-Kamenetskii MD: Unraveling Dna: The Most Important Molecule Of Life, 2nd edn. New York: Basic Books; 1997.
Koonin EV: Why the Central Dogma: on the nature of the great biological exclusion principle. Biol Direct 2015, 10, 52.
Prigogine IR, Stengers I: Order Out of Chaos. London: Bantam; 1984.
Lemon E, Stewart DW, Shawcroft RW: The Sun’s Work in a Cornfield. Science 1971, 174(4007), 371-378.
Toussaint O, Schneider ED: The thermodynamics and evolution of complexity in biological systems. Comp Biochem Physiol A Mol Integr Physiol 1998, 120(1), 3-9.
Pascal R, Pross A, Sutherland JD: Towards an evolutionary theory of the origin of life based on kinetics and thermodynamics. Open Biol 2013, 3(11), 130156.
Gell-Mann M: The Quark and the Jaguar: Adventures in the Simple and the Complex New York: St. Martin’s Griffin; 1995.
Adami C, Ofria C, Collier TC: Evolution of biological complexity. Proc Natl Acad Sci U S A 2000, 97(9), 4463-4468.
McShea DW, Brandon RN: Biology’s First Law: The Tendency for Diversity and Complexity to Increase in Evolutionary Systems. Chicago: Univ Chicago Press; 2010.
Adami C: What is complexity? Bioessays 2002, 24(12), 1085-1094.
Koonin EV: A non-adaptationist perspective on evolution of genomic complexity or the continued dethroning of man. Cell Cycle 2004, 3(3), 280-285.
Koonin EV: The meaning of biological information. Philos Trans A Math Phys Eng Sci 2016, 374(2063).
Heim NA, Payne JL, Finnegan S, Knope ML, Kowalewski M, Lyons SK, McShea DW, Novack-Gottshall PM, Smith FA, Wang SC: Hierarchical complexity and the size limits of life. Proc Biol Sci 2017, 284(1857).
Egelman E (ed.): Comprehensive Biophysics. New York: Academic Press; 2012.
Bohr N: The Atomic Theory and the Description of Nature. Oxford: Ox Bow Press; 1934.
Fisher RA: The Genetical Theory of Natural Selection. London & New York: Oxford University Press; 1930.
Gavrilets S: Fitness Landscapes and the Origin of Species. Princeton: Princeton University Press; 2004.
Gavrilets S, Gravner J: Percolation on the fitness hypercube and the evolution of reproductive isolation. J Theor Biol 1997, 184(1), 51-64.
Gravner J, Pitman D, Gavrilets S: Percolation on fitness landscapes: effects of correlation, phenotype, and incompatibilities. J Theor Biol 2007, 248(4), 627-645.
Shannon CE, Weaver W: The Mathematical Theory of Communication. Chicago: University of Illinois Press; 1949.
Lynch M: The origins of genome archiecture. Sunderland, MA: Sinauer Associates; 2007.
Lynch M, Conery JS: The origins of genome complexity. Science 2003, 302(5649), 1401-1404.
Lynch M: The frailty of adaptive hypotheses for the origins of organismal complexity. Proc Natl Acad Sci U S A 2007, 104 Suppl 1, 8597-8604.
Lynch M: The origins of eukaryotic gene structure. Mol Biol Evol 2006, 23(2), 450-468.
Koonin EV: Evolution of genome architecture. Int J Biochem Cell Biol 2009, 41(2), 298-306.
Maynard Smith J, Szathmary E: The Major Transitions in Evolution. Oxford: Oxford University Press; 1997.
Szathmary E: Toward major evolutionary transitions theory 2.0. Proc Natl Acad Sci U S A 2015, 112(33), 10104-10111.
Bloch I, Dalibard J, Zwerger W: Many-body physics with ultracold gases. Reviews of Modern Physics 2008, 80(3), 885-964.
Lewenstein M, Sanpera A, Ahufinger V: Ultracold Atoms in Optical Lattices: Simulating Quantum Many-Body Systems. Oxford: Oxford Univ Press; 2012.
Edwards SF, Anderson PW: Theory of spin glasses. J Phys F: Metal Phys 1975, 5, 965-974.
Mezard M, Parisi G, Virasoro MA (eds.): Spin Glass Theory and Beyond Singapore: World Scientific; 1987.
Rammal R, Toulouse G, Virasoro MA: Ultrametricity for physicists. Rev Mod Phys 1986, 58, 765-788.
Binder K, Young AP: Spin glasses: Experimental facts, theoretical concepts, and open questions. Rev Mod Phys 58, 801-976 1986, 58, 801-976.
Das SP: Mode-coupling theory and the glass transition in supercooled liquids. Rev Mod Phys 76, 785-851 2004, 76, 785-851.
Parisi G: A sequence of approximated solutions to the S-K model for spin glasses. J Phys A 1980, 13, 1101-1112.
Monasson R: Structural Glass Transition and the Entropy of the Metastable States. Phys Rev Lett 1995, 75, 2847-2850.
Schmalian G, Wolynes PG: Stripe Glasses: Self-Generated Randomness in a Uniformly Frustrated System. Phys Rev Lett 85, 836-839 2000, 85, 836-839.
Principi A, Katsnelson MI: Stripe glasses in ferromagnetic thin films. Phys Rev B 93 2016, 93, 054410.
Principi A, Katsnelson MI: Self-Induced Glassiness and Pattern Formation in Spin Systems Subject to Long-Range Interactions. Phys Rev Lett 117 2016, 117, 137201
Ruelle D: Statistical Mechanics: Rigorous Results Singapore: World Scientific; 1999.
Waddington CH, Robertson E: Selection for developmental canalisation. Genet Res 1966, 7(3), 303-312.
Flatt T: The evolutionary genetics of canalization. Q Rev Biol 2005, 80(3), 287-316.
Villain J, Bidaux R, Carton J-P, Conte R: Order as an effect of disorder. J Phys France 1980, 41, 1263-1272.
Henley CL: Ordering due to disorder in a frustrated vector antiferromagnet. Phys Rev Lett 1989, 62, 2056-2059.
Forterre P, Prangishvili D: The great billion-year war between ribosome- and capsid-encoding organisms (cells and viruses) as the major source of evolutionary novelties. Ann N Y Acad Sci 2009, 1178, 65-77.
Aravind L, Anantharaman V, Zhang D, de Souza RF, Iyer LM: Gene flow and biological conflict systems in the origin and evolution of eukaryotes. Front Cell Infect Microbiol 2012, 2, 89.
Stern A, Sorek R: The phage-host arms race: shaping the evolution of microbes. Bioessays 2011, 33(1), 43-51.
Koonin EV, Krupovic M: A Movable Defense. The Scientist 2015(january 1).
Jalasvuori M, Koonin EV: Classification of prokaryotic genetic replicators: between selfishness and altruism. Ann N Y Acad Sci 2015, 1341, 96-105.
Koonin EV, Starokadomskyy P: Are viruses alive? The replicator paradigm sheds decisive light on an old but misguided question. Stud Hist Philos Biol Biomed Sci 2016, 59, 125-134.
Holmes EC: The Evolution and Emergence of RNA Viruses. Oxford: Oxford University Press; 2009.
Koonin EV, Wolf YI, Katsnelson MI: Inevitability of the emergence and persistence of genetic parasites caused by thermodynamic instability of parasite-free states. Biol Direct 2017, in press.
Koonin EV: Viruses and mobile elements as drivers of evolutionary transitions. Philos Trans R Soc Lond B Biol Sci 2016, 371(1701).
Szathmary E: The evolution of replicators. Philos Trans R Soc Lond B Biol Sci 2000, 355(1403), 1669-1676.
Takeuchi N, Hogeweg P: Evolution of complexity in RNA-like replicator systems. Biol Direct 2008, 3, 11.
Takeuchi N, Hogeweg P: Evolutionary dynamics of RNA-like replicator systems: A bioinformatic approach to the origin of life. Phys Life Rev 2012, 9(3), 219-263.
Takeuchi N, Hogeweg P, Koonin EV: On the origin of DNA genomes: Evolution of the division of labor between template and catalyst in model replicator systems PLoS Comput Biol 2011, in press.
Makarova KS, Wolf YI, Koonin EV: Comparative genomics of defense systems in archaea and bacteria. Nucleic Acids Res 2013, 41(8), 4360-4377.
Koonin EV, Makarova KS, Wolf YI: Evolutionary Genomics of Defense Systems in Archaea and Bacteria. Annu Rev Microbiol 2017.
Ameisen JC: On the origin, evolution, and nature of programmed cell death: a timeline of four billion years. Cell Death Differ 2002, 9(4), 367-393.
Koonin EV, Aravind L: Origin and evolution of eukaryotic apoptosis: the bacterial connection. Cell Death Differ 2002, 9(4), 394-404.
Ameisen JC: Looking for death at the core of life in the light of evolution. Cell Death Differ 2004, 11(1), 4-10.
Kaczanowski S: Apoptosis: its origin, history, maintenance and the medical implications for cancer and aging. Phys Biol 2016, 13(3), 031001.
Koonin EV, Zhang F: Coupling immunity and programmed cell suicide in prokaryotes: Life-or-death choices. Bioessays 2017, 39(1), 1-9.
Iranzo J, Lobkovsky AE, Wolf YI, Koonin EV: Virus-host arms race at the joint origin of multicellularity and programmed cell death. Cell Cycle 2014, 13(19), 3083-3088.
Durand PM, Sym S, Michod RE: Programmed Cell Death and Complexity in Microbial Systems. Curr Biol 2016, 26(13), R587-593.
Embley TM, Martin W: Eukaryotic evolution, changes and challenges. Nature 2006, 440(7084), 623-630.
Embley TM, Williams TA: Evolution: Steps on the road to eukaryotes. Nature 2015, 521(7551), 169-170.
Martin W, Koonin EV: Introns and the origin of nucleus-cytosol compartmentation. Nature 2006, 440, 41-45.
Spang A, Saw JH, Jorgensen SL, Zaremba-Niedzwiedzka K, Martijn J, Lind AE, van Eijk R, Schleper C, Guy L, Ettema TJ: Complex archaea that bridge the gap between prokaryotes and eukaryotes. Nature 2015, 521(7551), 173-179.
Koonin EV: Origin of eukaryotes from within archaea, archaeal eukaryome and bursts of gene gain: eukaryogenesis just made easier? Philos Trans R Soc Lond B Biol Sci 2015, 370(1678), 20140333.
Koonin EV: Archaeal ancestors of eukaryotes: not so elusive any more. BMC Biol 2015, 13, 84.
Zaremba-Niedzwiedzka K, Caceres EF, Saw JH, Backstrom D, Juzokaite L, Vancaester E, Seitz KW, Anantharaman K, Starnawski P, Kjeldsen KU et al: Asgard archaea illuminate the origin of eukaryotic cellular complexity. Nature 2017, 541(7637), 353-358.
Lopez-Garcia P, Moreira D: Selective forces for the origin of the eukaryotic nucleus. Bioessays 2006, 28(5), 525-533.
Koonin EV: The origin of introns and their role in eukaryogenesis: a compromise solution to the introns-early versus introns-late debate? Biol Direct 2006, 1, 22.
Koonin EV: Intron-dominated genomes of early ancestors of eukaryotes. J Hered 2009, 100(5), 618-623.
Blackstone NW: Why did eukaryotes evolve only once? Genetic and energetic aspects of conflict and conflict mediation. Philos Trans R Soc Lond B Biol Sci 2013, 368(1622), 20120266.
Suomalainen A, Battersby BJ: Mitochondrial diseases: the contribution of organelle stress responses to pathology. Nat Rev Mol Cell Biol 2017.
Michod RE: Evolution of individuality during the transition from unicellular to multicellular life. Proc Natl Acad Sci U S A 2007, 104 Suppl 1, 8613-8618.
Leslie MP, Shelton DE, Michod RE: Generation time and fitness tradeoffs during the evolution of multicellularity. J Theor Biol 2017, 430, 92-102.
Aktipis CA, Boddy AM, Jansen G, Hibner U, Hochberg ME, Maley CC, Wilkinson GS: Cancer across the tree of life: cooperation and cheating in multicellularity. Philos Trans R Soc Lond B Biol Sci 2015, 370(1673).
Greaves M: Evolutionary determinants of cancer. Cancer Discov 2015, 5(8), 806-820.
Jacqueline C, Biro PA, Beckmann C, Moller AP, Renaud F, Sorci G, Tasiemski A, Ujvari B, Thomas F: Cancer: A disease at the crossroads of trade-offs. Evol Appl 2017, 10(3), 215-225.
Archetti M: Complementation, genetic conflict, and the evolution of sex and recombination. J Hered 2010, 101 Suppl 1, S21-33.
Gavrilets S: Is sexual conflict an «engine of speciation»? Cold Spring Harb Perspect Biol 2014, 6(12), a017723.
Nonacs P: Kinship, greenbeards, and runaway social selection in the evolution of social insect cooperation. Proc Natl Acad Sci U S A 2011, 108 Suppl 2, 10808-10815.
de Gennes P-G: Scaling Concepts in Polymer Physics Ithaca: Cornell Univ. Press 1979.
Doolittle WF: Phylogenetic classification and the universal tree. Science 1999, 284(5423), 2124-2129.
Doolittle WF: Uprooting the tree of life. Sci Am 2000, 282(2), 90-95.
Doolittle WF, Bapteste E: Pattern pluralism and the Tree of Life hypothesis. Proc Natl Acad Sci U S A 2007, 104(7), 2043-2049.
Bapteste E, Susko E, Leigh J, MacLeod D, Charlebois RL, Doolittle WF: Do orthologous gene phylogenies really support tree-thinking? BMC Evol Biol 2005, 5, 33.
Koonin EV, Dolja VV, Krupovic M: Origins and evolution of viruses of eukaryotes: The ultimate modularity. Virology 2015, 479-480, 2-25.
Iranzo J, Krupovic M, Koonin EV: The Double-Stranded DNA Virosphere as a Modular Hierarchical Network of Gene Sharing. MBio 2016, 7(4).
Iranzo J, Krupovic M, Koonin EV: A network perspective on the virus world. Commun Integr Biol 2017, 10(2), e1296614.
Pattee HH: The physics of symbols: bridging the epistemic cut. Biosystems 2001, 60(1-3), 5-21.
von Neumann J: Mathematical Foundations of Quantum Mechanics Princeton: Princeton Univ. Press; 1955.
Heisenberg W: The Physical Principles of the Quantum Theory New York: Dover 1949
Jammer M: The Conceptual Development of Quantum Mechanics New York: McGraw-Hill; 1966
Wheeler JA, Zurek WH (eds.): Quantum Theory and Measurements. Princeton: Princeton Univ. Press; 1983
Ballintine LE: Quantum Mechanics: a Modern Development. Singapore: World Scientific; 2003
Bohr N: The Philosophical Writings of Niels Bohr, vol. 4. Oxford: Ox Bow Press; 1987.
Giulini D, Joos E, Kiefer C, Kupsch J, Stamatescu I-O, Zeh HD: Decoherence and the Appearance of a Classical World in Quantum Theory Berlin: Springer; 1996.
Zurek WH: Decoherence, einselection, and the quantum origins of the classical. Rev Mod Phys 2003 75, 715-775.
Allaverdyan AE, Ballian R, Nieuwenhuizen TM: Understanding quantum measurement from the solution of dynamical models. Phys Rep 2013 525 1-166.
De Raedt H, Katsnelson MI, Michielsen K: Quantum theory as the most robust description of reproducible experiments
Ann Phys 2014, 347, 45-73.
De Raedt H, Katsnelson MI, Michielsen K: Quantum theory as plausible reasoning applied to data obtained by robust experiments
Phil Trans Royal Soc A 2016, 374, 20150233
Pattee HH: Quantum mechanics, heredity and the origin of life. J Theor Biol 1967, 17(3), 410-420.
Frank SA: Natural selection. V. How to read the fundamental equations of evolutionary change in terms of information theory. J Evol Biol 2012, 25(12), 2377-2396.
Muller HJ: The Relation of Recombination to Mutational Advance. Mutat Res 1964, 106, 2-9.
Haigh J: The accumulation of deleterious genes in a population—Muller’s Ratchet. Theor Popul Biol 1978, 14(2), 251-267.
Lynch M, Gabriel W: Mutation Load and the Survival of Small Populations. Evolution 1990, 44(7), 1725-1737.
Redfield RJ: Evolution of bacterial transformation: is sex with dead cells ever better than no sex at all? Genetics 1988, 119(1), 213-221.
Iranzo J, Puigbo P, Lobkovsky AE, Wolf YI, Koonin EV: Inevitability of Genetic Parasites. Genome Biol Evol 2016, 8(9), 2856-2869.
Takeuchi N, Kaneko K, Koonin EV: Horizontal gene transfer can rescue prokaryotes from Muller’s ratchet: benefit of DNA from dead cells and population subdivision. G3 (Bethesda) 2014, 4(2), 325-339.
Feynman RP, Hibbs AR: Quantum Mechanics and Path Integrals. New York: McGraw Hill; 1965
Bennett CH: Demons, engines, and the Second Law. Sci Am 1987, 257, 108-117.
Bennett CH: Notes on Landauer’s principle, reversible computation, and Maxwell’s Demon. Studies in History and Philosophy of Science Part B: Studies in History and Philosophy of Modern Physics 2003, 34, 501-510.
Landauer R: Irreversibility and Heat Generation in the Computing Process. IBM Journal of Research and Development 1961, 5, 183-191.
У нас была секретарём кафедры Виктория Васильевна Розанцева, которая мне рассказала, что тогда составлялся «особый список абитуриентов». И была «особая комиссия», занимавшаяся приёмом экзаменов у этих абитуриентов.Читать далее →
Биологические системы достигают организации, которая значительно превышает сложность любого из известных неживых объектов. Биологические сущности, несомненно, подчиняются законам квантовой физики и статистической механики. Однако, достаточно ли современной физики для адекватного описания модели и объяснения эволюции?Читать далее →
В последние годы он увлекался вопросами квантовой теории измерений и опубликовал на эту тему ряд интересных статей. В то же время он выполнил ряд очень сложных и глубоких исследований по кинетической теории систем с химическими реакциями.Читать далее →
Градштейн, вроде бы, первым начал заниматься дифференциальными уравнениями с малым параметром при старшей производной. А потом эта тематика понравилась Тихонову. И Градштейн где-то высказался, что, мол, Тихонов публикует то, что у меня уже было сделано.Читать далее →